Cell Tracking

In cooperation with Biocenter Oulu we have developed a solution for analyzing dynamic behavior of cells in phase-contrast images. Our current cell tracking system can track individual cells and provide detailed spatio-temporal measurements of cell behaviors including cell count and migration speed together with direction.

References

Kaakinen M, Huttunen S, Paavolainen L, Marjomäki V, Heikkilä J & Eklund L (2014)
Automatic detection and analysis of cell motility in phase-contrast time-lapse images using a combination of maximally stable extremal regions and Kalman filter approaches. Journal of Microscopy, January, 253(1):65-78.
 
Paper link
Project page

Last updated: 26.8.2016